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	<title>Soil Ecology Wiki - User contributions [en]</title>
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	<updated>2026-04-14T07:28:53Z</updated>
	<subtitle>User contributions</subtitle>
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	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7330</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7330"/>
		<updated>2021-05-14T20:27:25Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) elevation, successional stage, vegetation and canopy presence[4,5]. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. Microclimate, especially temperature and moisture, regulates activity rates of decomposers[7]. High fluctuations in microclimate has been shown to lead to high [[moss|bryophyte]] diversity. [6] This high heterogeneity of conditions may contribute to high overall [[biodiversity interactions|soil biodiversity]] as well. &lt;br /&gt;
&lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[3] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events. Soil texture greatly influences local microclimate by regulating availability of surface water films and water-holding capacity [7].&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
4.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
5.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
6.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;br /&gt;
&lt;br /&gt;
7. Coleman, David C., Callaham Jr., Mac A., and Crossley Jr., D. A. “Fundamentals of [[Soil Ecology]], Third Edition.” 2018. Academic Press. Cambridge, MA.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7329</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7329"/>
		<updated>2021-05-14T20:26:33Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* In Soils */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) elevation, successional stage, vegetation and canopy presence[4,5]. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. Microclimate, especially temperature and moisture, regulates activity rates of decomposers[7]. High fluctuations in microclimate has been shown to lead to high [[moss|bryophyte]] diversity. [6] This high heterogeneity of conditions may contribute to high overall [[biodiversity interactions|soil biodiversity]] as well. &lt;br /&gt;
&lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[3] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events. Soil texture greatly influences local microclimate by regulating availability of surface water films and water-holding capacity [7].&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
4.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
5.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
6.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7328</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7328"/>
		<updated>2021-05-14T20:26:17Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* In Soils */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) elevation, successional stage, vegetation and canopy presence[4,5]. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. Microclimate, especially temperature and moisture, regulates activity rates of decomposers[9]. High fluctuations in microclimate has been shown to lead to high [[moss|bryophyte]] diversity. [6] This high heterogeneity of conditions may contribute to high overall [[biodiversity interactions|soil biodiversity]] as well. &lt;br /&gt;
&lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[3] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events. Soil texture greatly influences local microclimate by regulating availability of surface water films and water-holding capacity [9].&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
4.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
5.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
6.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7277</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7277"/>
		<updated>2021-05-07T19:32:52Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include plant metabolites like [[Plant Hormones|auxin and cytokinin]], plant metabolites like [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
[[File:Allelopathy_conceptual_model.png|400px|thumb|right|Conceptual diagram that highlights the primary sources of variation in allelopathy within plant communities, and there is clearly potential for interactions among these sources of variation. The study of allelopathy must incorporate a broader view that includes the diverse range of interactions and contingencies into its conceptual framework. This approach will allow the development of a more complete theoretical basis for allelopathy and its role in plant communities. Meiners et al 2012]]&lt;br /&gt;
&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7275</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7275"/>
		<updated>2021-05-07T19:28:31Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
[[File:baermann.png|thumb|Baermann Funnel, Bhat and Rao 2020]]&lt;br /&gt;
&lt;br /&gt;
== Nematode Sampling ==&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
== Ground Level Arthropod Sampling ==&lt;br /&gt;
[[File:Berlese_tullgren.png|thumb|Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et al 2012]]&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs can also consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Root Sampling ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[2] Bhat A.I., Rao G.P. (2020) Transmission of Viruses Through [[Nematodes]]. In: Characterization of Plant Viruses. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0334-5_19&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
[6] Sapkota, T.B., Mazzoncini, M., Bàrberi, P. et al. Fifteen years of no till increase soil organic matter, microbial biomass and [[arthropod]] diversity in cover crop-based arable cropping systems. Agron. Sustain. Dev. 32, 853–863 (2012). https://doi.org/10.1007/s13593-011-0079-0&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7274</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7274"/>
		<updated>2021-05-07T19:27:16Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Baermann Funnel */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
[[File:baermann.png|thumb|Baermann Funnel, Bhat and Rao 2020]]&lt;br /&gt;
== Nematode Sampling ==&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
[[File:Berlese_tullgren.png|thumb|Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et al 2012]]&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[2] Bhat A.I., Rao G.P. (2020) Transmission of Viruses Through [[Nematodes]]. In: Characterization of Plant Viruses. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0334-5_19&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
[6] Sapkota, T.B., Mazzoncini, M., Bàrberi, P. et al. Fifteen years of no till increase soil organic matter, microbial biomass and [[arthropod]] diversity in cover crop-based arable cropping systems. Agron. Sustain. Dev. 32, 853–863 (2012). https://doi.org/10.1007/s13593-011-0079-0&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7271</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=7271"/>
		<updated>2021-05-07T19:21:12Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) elevation, successional stage, vegetation and canopy presence[4,5]. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. High fluctuations in microclimate has been shown to lead to high [[moss|bryophyte]] diversity. [6] This high heterogeneity of conditions may contribute to high overall [[biodiversity interactions|soil biodiversity]] as well. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[3] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
4.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
5.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
6.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7270</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7270"/>
		<updated>2021-05-07T19:16:38Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
[[File:baermann.png|thumb|Baermann Funnel, Bhat and Rao 2020]]&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
[[File:Berlese_tullgren.png|thumb|Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et al 2012]]&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[2] Bhat A.I., Rao G.P. (2020) Transmission of Viruses Through [[Nematodes]]. In: Characterization of Plant Viruses. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0334-5_19&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
[6] Sapkota, T.B., Mazzoncini, M., Bàrberi, P. et al. Fifteen years of no till increase soil organic matter, microbial biomass and [[arthropod]] diversity in cover crop-based arable cropping systems. Agron. Sustain. Dev. 32, 853–863 (2012). https://doi.org/10.1007/s13593-011-0079-0&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7269</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7269"/>
		<updated>2021-05-07T19:15:16Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
[[File:baermann.png|thumb|Baermann Funnel, Bhat and Rao 2020]]&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
[[File:Berlese_tullgren.png|thumb|Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et al 2012]]&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[2] Bhat A.I., Rao G.P. (2020) Transmission of Viruses Through [[Nematodes]]. In: Characterization of Plant Viruses. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0334-5_19&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
[6] Sapkota, T.B., Mazzoncini, M., Bàrberi, P. et al. Fifteen years of no till increase soil organic matter, microbial biomass and [[arthropod]] diversity in cover crop-based arable cropping systems. Agron. Sustain. Dev. 32, 853–863 (2012). https://doi.org/10.1007/s13593-011-0079-0&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=File:Baermann.png&amp;diff=7268</id>
		<title>File:Baermann.png</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=File:Baermann.png&amp;diff=7268"/>
		<updated>2021-05-07T19:14:03Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7267</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7267"/>
		<updated>2021-05-07T19:13:01Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
[[File:Berlese_tullgren.png|thumb|Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et al 2012]]&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[2] Bhat A.I., Rao G.P. (2020) Transmission of Viruses Through [[Nematodes]]. In: Characterization of Plant Viruses. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0334-5_19&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
[6] Sapkota, T.B., Mazzoncini, M., Bàrberi, P. et al. Fifteen years of no till increase soil organic matter, microbial biomass and [[arthropod]] diversity in cover crop-based arable cropping systems. Agron. Sustain. Dev. 32, 853–863 (2012). https://doi.org/10.1007/s13593-011-0079-0&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7266</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7266"/>
		<updated>2021-05-07T19:09:58Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese_tullgren.png|thumb|Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et al 2012]]&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
[2] Bhat A.I., Rao G.P. (2020) Transmission of Viruses Through [[Nematodes]]. In: Characterization of Plant Viruses. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0334-5_19&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=File:Berlese_tullgren.png&amp;diff=7265</id>
		<title>File:Berlese tullgren.png</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=File:Berlese_tullgren.png&amp;diff=7265"/>
		<updated>2021-05-07T19:08:45Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et...&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Berlese-Tullgren funnel for micro-arthropods extraction. It contains a sample container with wire mesh, a plastic funnel over which the sample container is placed and a collecting vessel below the funnel which contains a liquid preservative. Sapkota et al 2012&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7262</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7262"/>
		<updated>2021-05-07T19:03:52Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
[2] Bhat A.I., Rao G.P. (2020) Transmission of Viruses Through [[Nematodes]]. In: Characterization of Plant Viruses. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0334-5_19&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7259</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7259"/>
		<updated>2021-05-07T19:01:44Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
[5] Benfield EF (2006) Decomposition of leaf material. In: Hauer FR, Lamberti GA (eds) Methods in stream [[ecology]], 2nd edn. Academic Press, Burlington, pp 12&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7181</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7181"/>
		<updated>2021-05-07T17:14:56Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Baermann Funnel */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7180</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7180"/>
		<updated>2021-05-07T17:14:04Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
[3] Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi (Apparatus for gathering early and in large numbers small arthropods) (in Italian). pp. 85–90.&lt;br /&gt;
&lt;br /&gt;
[4] Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German).&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7179</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7179"/>
		<updated>2021-05-07T17:11:36Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
 Berlese, Antonio (1905). Apparecchio per raccogliere presto ed in gran numero piccoli Artropodi [Apparatus for gathering early and in large numbers small arthropods] (in Italian). pp. 85–90. OCLC 79048180.&lt;br /&gt;
&lt;br /&gt;
 Tullgren, A (26 August 2009). &amp;quot;Ein sehr einfacher Ausleseapparat für terricole Tierformen&amp;quot; [A very simple readout device for terricole animal forms]. Zeitschrift für Angewandte Entomologie (in German). 4 (1): 149–150. doi:10.1111/j.1439-0418.1918.tb00820.x.&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7178</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7178"/>
		<updated>2021-05-07T17:11:19Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Berlese/Tullgren Funnel */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Tullgren funnels are used to assess species richness in leaf litter [[arthropods]]. Leaf litter samples are typically placed in Tullgren funnels to sample for soil micro- and mesofauna. The Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below.&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Ecology&amp;diff=7172</id>
		<title>Soil Ecology</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Ecology&amp;diff=7172"/>
		<updated>2021-05-07T16:41:46Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[Soil]] is a vast reservoir for a wide [[diversity]] of [[organisms]]. [[Plant roots]] explore this [[diversity]] daily. Various other [[animals]] consume [[smaller creatures]] either intentionally or unintentionally by [[foraging]] on [[plant roots]], [[insects]], and [[microorganisms]].&lt;br /&gt;
Soil [[ecology]] is the study of how these [[soil organisms]] interact with other organisms and their environment - their influence on and response to numerous [[soil processes]] and [[properties]] form the basis for delivering [[essential ecosystem services]]. Some of the key processes in soil are [[nutrient cycling]], soil [[aggregate formation]], and [[biodiversity interactions]]. The heterogenous nature of soil results in numerous [[microclimate|microclimates]] that may contribute to high soil biodiversity.&lt;br /&gt;
The [[diversity]] and abundance of [[soil life]] exceeds that of any other ecosystem. [[Plant establishment]], competitiveness, and growth is governed largely by the [[ecology belowground]], so understanding this system is an essential component of plant sciences and [[terrestrial ecology]].&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7156</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=7156"/>
		<updated>2021-05-07T15:59:09Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Leaf Litter Pack */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings filled with a mixture of palatable organic material like fresh leaf litter and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. A small hole is dug in the ground, into which the bag is placed and then loosely covered with [[soil|soil]] and surrounding leaves. Marking the spot with a bag is generally recommended so that the bag can be retrieved later. The leaf pack is generally left for a 1-3 days to allow organisms to get into the bag before removal. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be placed]]&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7124</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7124"/>
		<updated>2021-05-07T13:37:49Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Mechanism */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include plant metabolites like [[Plant Hormones|auxin and cytokinin]], plant metabolites like [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
[[File:Allelopathy_conceptual_model.png|400px|thumb|right|Conceptual diagram that highlights the primary sources of variation in allelopathy within plant communities. Though dealt with separately in this article, there is clearly potential for interactions among these sources of variation. The study of allelopathy must incorporate a broader view that includes the diverse range of interactions and contingencies into its conceptual framework. This approach will allow the development of a more complete theoretical basis for allelopathy and its role in plant communities. Meiners et al 2012]]&lt;br /&gt;
&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7123</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7123"/>
		<updated>2021-05-07T13:34:32Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Ecology */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include substances like [[Plant Hormones]] such as [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
[[File:Allelopathy_conceptual_model.png|400px|thumb|right|Conceptual diagram that highlights the primary sources of variation in allelopathy within plant communities. Though dealt with separately in this article, there is clearly potential for interactions among these sources of variation. The study of allelopathy must incorporate a broader view that includes the diverse range of interactions and contingencies into its conceptual framework. This approach will allow the development of a more complete theoretical basis for allelopathy and its role in plant communities. Meiners et al 2012]]&lt;br /&gt;
&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7122</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7122"/>
		<updated>2021-05-07T13:34:15Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Ecology */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include substances like [[Plant Hormones]] such as [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
[[File:Allelopathy_conceptual_model.png|400px|thumb|left|Conceptual diagram that highlights the primary sources of variation in allelopathy within plant communities. Though dealt with separately in this article, there is clearly potential for interactions among these sources of variation. The study of allelopathy must incorporate a broader view that includes the diverse range of interactions and contingencies into its conceptual framework. This approach will allow the development of a more complete theoretical basis for allelopathy and its role in plant communities. Meiners et al 2012]]&lt;br /&gt;
&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7121</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=7121"/>
		<updated>2021-05-07T13:33:29Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include substances like [[Plant Hormones]] such as [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
[[File:Allelopathy-conceptual-model.png|400px|thumb|left|Conceptual diagram that highlights the primary sources of variation in allelopathy within plant communities. Though dealt with separately in this article, there is clearly potential for interactions among these sources of variation. The study of allelopathy must incorporate a broader view that includes the diverse range of interactions and contingencies into its conceptual framework. This approach will allow the development of a more complete theoretical basis for allelopathy and its role in plant communities. Meiners et al 2012]]&lt;br /&gt;
&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=File:Allelopathy_conceptual_model.png&amp;diff=7120</id>
		<title>File:Allelopathy conceptual model.png</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=File:Allelopathy_conceptual_model.png&amp;diff=7120"/>
		<updated>2021-05-07T13:21:35Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: Conceptual diagram that highlights the primary sources
 of variation in allelopathy within plant communities. Though
 dealt with separately in this article, there is clearly potential for
 interactions among these sources of variation. The study of
 al...&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Conceptual diagram that highlights the primary sources&lt;br /&gt;
 of variation in allelopathy within plant communities. Though&lt;br /&gt;
 dealt with separately in this article, there is clearly potential for&lt;br /&gt;
 interactions among these sources of variation. The study of&lt;br /&gt;
 allelopathy must incorporate a broader view that includes the&lt;br /&gt;
 diverse range of interactions and contingencies into its&lt;br /&gt;
 conceptual framework. This approach will allow the develop&lt;br /&gt;
 ment of a more complete theoretical basis for allelopathy and its&lt;br /&gt;
 role in plant communities. From Meiners et al 2012&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6969</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6969"/>
		<updated>2021-05-05T20:02:34Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Mechanism */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include substances like [[Plant Hormones]] such as [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6967</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6967"/>
		<updated>2021-05-05T19:58:44Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Rhizotron */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings, with leaves and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. You dig a small hole in the ground, place the bag in the hole and cover it up with the [[soil|soil]] and surrounding leaves. Then, place a flag sticking out of the ground next to the bag so you can find it later. Let the leaf pack sit for a couple days to allow organisms to get into the bag before you remove it. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be buried]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel, allowing for non-destructive study of the roots and rhizosphere. Smaller rhizotrons can be built with a sturdy, clear material for study of individual plants and smaller systems. The roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6957</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6957"/>
		<updated>2021-05-05T19:52:21Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Rhizotron */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings, with leaves and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. You dig a small hole in the ground, place the bag in the hole and cover it up with the [[soil|soil]] and surrounding leaves. Then, place a flag sticking out of the ground next to the bag so you can find it later. Let the leaf pack sit for a couple days to allow organisms to get into the bag before you remove it. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be buried]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The main advantage of a rhizotron is that it allows study of the roots with minimal destruction. The largest example of a rhizotron is a tunnel built underground with windows placed all around the tunnel so you can observe the roots and rhizosphere. As a result, the roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6956</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6956"/>
		<updated>2021-05-05T19:48:48Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* In Soils */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. High fluctuations in microclimate has been shown to lead to high [[moss|bryophyte]] diversity. [8] This high heterogeneity of conditions may contribute to high overall [[biodiversity interactions|soil biodiversity]] as well. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[4] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6954</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6954"/>
		<updated>2021-05-05T19:47:41Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* In Soils */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. High fluctuations in microclimate has been shown to lead to high [[moss|bryophyte]] diversity. [8] This high heterogeneity of conditions may contribute to high overall soil biodiversity as well. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[4] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6951</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6951"/>
		<updated>2021-05-05T19:45:19Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include things like [[Plant Hormones]] such as [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6949</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6949"/>
		<updated>2021-05-05T19:44:06Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* Mechanism */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds include things like [[plant hormones]] such as [[flavonoids]] as well as antifeedants like emodin, and allow plants to behave in numerous ways.[3]  [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense. The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition[1].&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6947</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6947"/>
		<updated>2021-05-05T19:41:40Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. High fluctuations in microclimate has been shown to lead to high bryophyte diversity. [8] This high heterogeneity of conditions may contribute to high overall soil biodiversity as well. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[4] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6943</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6943"/>
		<updated>2021-05-05T19:38:54Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. High fluctuations in microclimate has been shown to lead to high bryophyte diversity. [8] This high heterogeneity of conditions may contribute to high overall soil biodiversity as well. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[4] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
5.	Kaufman, D. W., Peterson, S. K., Fristik, R. &amp;amp; Kaufman, G. A. Effect of Microhabitat Features on Habitat Use by Peromyscus leucopus. &#039;&#039;American Midland Naturalist&#039;&#039; &#039;&#039;&#039;110&#039;&#039;&#039;, 177 (1983).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6921</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6921"/>
		<updated>2021-05-05T19:27:43Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can influence microclimate, as they may increase humidity and stabilize temperature. Presence of herbaceous and woody vegetation can also greatly influence microclimate, as they create structure and shade. [2] &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. High fluctuations in microclimate has been shown to lead to high bryophyte diversity. [8] This high heterogeneity of conditions may contribute to high overall soil biodiversity as well. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]].[4] Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Blackith, R. M. Interrelationships between Small [[Arthropods]] and [[Nematodes]] in Peat. &#039;&#039;Proceedings of the Royal Irish Academy, Section B: Biological, Geological, and Chemical Science&#039;&#039; &#039;&#039;&#039;75&#039;&#039;&#039;, 12 (1975).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
5.	Kaufman, D. W., Peterson, S. K., Fristik, R. &amp;amp; Kaufman, G. A. Effect of Microhabitat Features on Habitat Use by Peromyscus leucopus. &#039;&#039;American Midland Naturalist&#039;&#039; &#039;&#039;&#039;110&#039;&#039;&#039;, 177 (1983).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6911</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6911"/>
		<updated>2021-05-05T19:20:35Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* In Soils */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. However, succession is often community driven even if there are harsher abiotic limits set, so herbaceous and woody species also have an influence. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can also influence microclimate, as they may increase humidity and stabilize temperature. &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. This high heterogeneity of conditions may contribute to high soil biodiversity. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]][4]. Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Blackith, R. M. Interrelationships between Small [[Arthropods]] and [[Nematodes]] in Peat. &#039;&#039;Proceedings of the Royal Irish Academy, Section B: Biological, Geological, and Chemical Science&#039;&#039; &#039;&#039;&#039;75&#039;&#039;&#039;, 12 (1975).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
5.	Kaufman, D. W., Peterson, S. K., Fristik, R. &amp;amp; Kaufman, G. A. Effect of Microhabitat Features on Habitat Use by Peromyscus leucopus. &#039;&#039;American Midland Naturalist&#039;&#039; &#039;&#039;&#039;110&#039;&#039;&#039;, 177 (1983).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6907</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6907"/>
		<updated>2021-05-05T19:19:04Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface. Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, [1] ]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. However, succession is often community driven even if there are harsher abiotic limits set, so herbaceous and woody species also have an influence. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can also influence microclimate, as they may increase humidity and stabilize temperature. &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. This high heterogeneity of conditions may contribute to high soil biodiversity. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]]. Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Blackith, R. M. Interrelationships between Small [[Arthropods]] and [[Nematodes]] in Peat. &#039;&#039;Proceedings of the Royal Irish Academy, Section B: Biological, Geological, and Chemical Science&#039;&#039; &#039;&#039;&#039;75&#039;&#039;&#039;, 12 (1975).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
5.	Kaufman, D. W., Peterson, S. K., Fristik, R. &amp;amp; Kaufman, G. A. Effect of Microhabitat Features on Habitat Use by Peromyscus leucopus. &#039;&#039;American Midland Naturalist&#039;&#039; &#039;&#039;&#039;110&#039;&#039;&#039;, 177 (1983).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6899</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6899"/>
		<updated>2021-05-05T19:13:19Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: /* References */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface (Geiger 1965). Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, Kearney et al]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. However, succession is often community driven even if there are harsher abiotic limits set, so herbaceous and woody species also have an influence. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can also influence microclimate, as they may increase humidity and stabilize temperature. &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. This high heterogeneity of conditions may contribute to high soil biodiversity. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]]. Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
&lt;br /&gt;
3.	Blackith, R. M. Interrelationships between Small [[Arthropods]] and [[Nematodes]] in Peat. &#039;&#039;Proceedings of the Royal Irish Academy, Section B: Biological, Geological, and Chemical Science&#039;&#039; &#039;&#039;&#039;75&#039;&#039;&#039;, 12 (1975).&lt;br /&gt;
&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
&lt;br /&gt;
5.	Kaufman, D. W., Peterson, S. K., Fristik, R. &amp;amp; Kaufman, G. A. Effect of Microhabitat Features on Habitat Use by Peromyscus leucopus. &#039;&#039;American Midland Naturalist&#039;&#039; &#039;&#039;&#039;110&#039;&#039;&#039;, 177 (1983).&lt;br /&gt;
&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6898</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6898"/>
		<updated>2021-05-05T19:12:55Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface (Geiger 1965). Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, Kearney et al]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. However, succession is often community driven even if there are harsher abiotic limits set, so herbaceous and woody species also have an influence. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can also influence microclimate, as they may increase humidity and stabilize temperature. &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. This high heterogeneity of conditions may contribute to high soil biodiversity. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]]. Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;br /&gt;
==References==&lt;br /&gt;
1.	Kearney, M. R., Isaac, A. P. &amp;amp; Porter, W. P. microclim: Global estimates of hourly microclimate based on long-term monthly climate averages. &#039;&#039;Sci Data&#039;&#039; &#039;&#039;&#039;1&#039;&#039;&#039;, 140006 (2014).&lt;br /&gt;
2.	Breshears, D. D., Nyhan, J. W., Heil, C. E. &amp;amp; Wilcox, B. P. Effects of Woody Plants on Microclimate in a Semiarid Woodland: Soil Temperature and Evaporation in Canopy and Intercanopy Patches. &#039;&#039;International Journal of Plant Sciences&#039;&#039; &#039;&#039;&#039;159&#039;&#039;&#039;, 1010–1017 (1998).&lt;br /&gt;
3.	Blackith, R. M. Interrelationships between Small [[Arthropods]] and [[Nematodes]] in Peat. &#039;&#039;Proceedings of the Royal Irish Academy, Section B: Biological, Geological, and Chemical Science&#039;&#039; &#039;&#039;&#039;75&#039;&#039;&#039;, 12 (1975).&lt;br /&gt;
4.	Cécillon, L., de Mello, N. A., De Danieli, S. &amp;amp; Brun, J.-J. Soil macroaggregate dynamics in a mountain spatial climate gradient. &#039;&#039;Biogeochemistry&#039;&#039; &#039;&#039;&#039;97&#039;&#039;&#039;, 31–43 (2010).&lt;br /&gt;
5.	Kaufman, D. W., Peterson, S. K., Fristik, R. &amp;amp; Kaufman, G. A. Effect of Microhabitat Features on Habitat Use by Peromyscus leucopus. &#039;&#039;American Midland Naturalist&#039;&#039; &#039;&#039;&#039;110&#039;&#039;&#039;, 177 (1983).&lt;br /&gt;
6.	Tsuyuzaki, S., Matsuda, M. &amp;amp; Akasaka, M. Effect of a deciduous shrub on microclimate along an elevation gradient, Mount Koma, northern Japan. &#039;&#039;Clim. Res&#039;&#039;. &#039;&#039;&#039;51&#039;&#039;&#039;, 1–10 (2012).&lt;br /&gt;
7.	Frey, S. J. K., Hadley, A. S. &amp;amp; Betts, M. G. Microclimate predicts within-season distribution dynamics of montane forest birds. &#039;&#039;[[Diversity]] Distrib&#039;&#039;. &#039;&#039;&#039;22&#039;&#039;&#039;, 944–959 (2016).&lt;br /&gt;
8.	Kraichak, E. Microclimate Fluctuation Correlated with Beta Diversity of Epiphyllous Bryophyte Communities. &#039;&#039;Biotropica&#039;&#039; &#039;&#039;&#039;46&#039;&#039;&#039;, 575–582 (2014).&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6867</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6867"/>
		<updated>2021-05-05T18:53:11Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings, with leaves and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. You dig a small hole in the ground, place the bag in the hole and cover it up with the [[soil|soil]] and surrounding leaves. Then, place a flag sticking out of the ground next to the bag so you can find it later. Let the leaf pack sit for a couple days to allow organisms to get into the bag before you remove it. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be buried]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest advantage of the rhizotron is that it allows study of the roots with minimal destruction. The largest example of a rhizotron may be a tunnel built underground with windows placed all around the tunnel so you can observe the root and organisms interact. The roots from the plants above will grow down eventually hit and grow past the rhizotron. As a result, the roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work. &lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6864</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6864"/>
		<updated>2021-05-05T18:52:38Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganisms|microorganism]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings, with leaves and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. You dig a small hole in the ground, place the bag in the hole and cover it up with the [[soil|soil]] and surrounding leaves. Then, place a flag sticking out of the ground next to the bag so you can find it later. Let the leaf pack sit for a couple days to allow organisms to get into the bag before you remove it. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be buried]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest advantage of the rhizotron is that it allows study of the roots with minimal destruction. The largest example of a rhizotron may be a tunnel built underground with windows placed all around the tunnel so you can observe the root and organisms interact. The roots from the plants above will grow down eventually hit and grow past the rhizotron. As a result, the roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work. &lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6863</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6863"/>
		<updated>2021-05-05T18:52:09Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. Study subjects include type of [[organisms|organisms]] living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for measurement of different target [[organisms]] and variables.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measurement of microfauna and [[microorganism|microorganisms]] abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside is attached via tube to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel, it is then filled with water. Organisms like [[nematodes|nematodes]] will move down through the soil and water, through the mesh and into the bottom of the tube. After  24 to 48 hours, the clamp is opened, allowing the organisms to drain into a petri dish. Samples can then be identified via microscopy.&lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings, with leaves and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. You dig a small hole in the ground, place the bag in the hole and cover it up with the [[soil|soil]] and surrounding leaves. Then, place a flag sticking out of the ground next to the bag so you can find it later. Let the leaf pack sit for a couple days to allow organisms to get into the bag before you remove it. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be buried]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest advantage of the rhizotron is that it allows study of the roots with minimal destruction. The largest example of a rhizotron may be a tunnel built underground with windows placed all around the tunnel so you can observe the root and organisms interact. The roots from the plants above will grow down eventually hit and grow past the rhizotron. As a result, the roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work. &lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6845</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6845"/>
		<updated>2021-05-05T18:41:00Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. We can measure things like, what kind of [[organisms|organisms]] are living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for different types of [[organisms]] you are trying to extract. As well as different methods for measuring variables you are trying to observe like decomposition.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measure nematode abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside. There is a tube attached to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel you fill up the funnel to the rim with water. This water pushes the [[small creaters|small creaters]] through the filter into the bottom of the tube. Organisms like [[nematodes|nematodes]] will also swim down through the soil and water, through the mesh and into the bottom of the tube. After it sets for 24 to 48 hours, so all the [[organisms|organisms]] have time to filter down to the bottom. Then we open the clamp and allow the organism to drain into a petri dish. We can take the petri dish under a microscope and look for the [[microorganisms|microorganisms]] that were living in the soil. &lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter packs consist of a mesh bag, usually with 1/4 inch openings, with leaves and lettuce. The size in the mesh is varied based on the size of target [[organisms|organisms]]. The mesh is large enough so target organisms can crawl into the bag, and small enough so they generally can not leave. Leaf packs should be placed on a low spot on the ground in order to maximize capture: this is where soil is most fertile, and where moisture content is highest. You dig a small hole in the ground, place the bag in the hole and cover it up with the [[soil|soil]] and surrounding leaves. Then, place a flag sticking out of the ground next to the bag so you can find it later. Let the leaf pack sit for a couple days to allow organisms to get into the bag before you remove it. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be buried]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb| Underground rhizotron]]&lt;br /&gt;
&lt;br /&gt;
Rhizotrons come in various sizes, which allow for study at multiple scales. The largest advantage of the rhizotron is that it allows study of the roots with minimal destruction. The largest example of a rhizotron may be a tunnel built underground with windows placed all around the tunnel so you can observe the root and organisms interact. The roots from the plants above will grow down eventually hit and grow past the rhizotron. As a result, the roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and [[rhizosphere]]. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work. &lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6810</id>
		<title>Soil Sampling Methods</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Soil_Sampling_Methods&amp;diff=6810"/>
		<updated>2021-05-05T18:25:49Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;br /&gt;
&lt;br /&gt;
[[File:Baermann funnel.jpg|thumb|Baermann Funnel]]&lt;br /&gt;
&lt;br /&gt;
[[Soil]] sampling gives is useful for determining the structure and function of the [[soil|soil]] community. We can measure things like, what kind of [[organisms|organisms]] are living in the soil, the [[plant roots|plant roots]] structure, leaf litter break down and [[decomposition]]. There are different methods of soil sampling, for different types of [[organisms]] you are trying to extract. As well as different methods for measuring variables you are trying to observe like decomposition.&lt;br /&gt;
&lt;br /&gt;
== Baermann Funnel ==&lt;br /&gt;
&lt;br /&gt;
Baermann funnels are useful for measure nematode abundance and richness in a soil sample. A funnel with a small mesh or muslin lining on the inside. There is a tube attached to the bottom of the funnel, which is clamped shut at the bottom. When the soil is placed in the funnel you fill up the funnel to the rim with water. This water pushes the [[small creaters|small creaters]] through the filter into the bottom of the tube. Organisms like [[nematodes|nematodes]] will also swim down through the soil and water, through the mesh and into the bottom of the tube. After it sets for 24 to 48 hours, so all the [[organisms|organisms]] have time to filter down to the bottom. Then we open the clamp and allow the organism to drain into a petri dish. We can take the petri dish under a microscope and look for the [[microorganisms|microorganisms]] that were living in the soil. &lt;br /&gt;
&lt;br /&gt;
[[File:Berlese funnel.jpg|thumb|Berlese/Tullgren Funnel]]&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
&lt;br /&gt;
== Berlese/Tullgren Funnel ==&lt;br /&gt;
&lt;br /&gt;
Leaf litter samples are typically placed in Berlese-Tullgren funnels to sample for soil micro- and mesofauna.The Berlese-Tullgren apparatus consists of a funnel, a light source, a screen, and a receptacle into which the [[animals]] fall. The sample is placed in a funnel that is lined with a screen with the light source above; the extraction process works by desiccating the soil from above via heat lamp, forcing the fauna downward through the funnel into the sampling liquid below. Organisms one may capture via this method include [[arthropods]] like, [[insects|insects]], [[myriapoda|myriapoda]], and crustaceans. &lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
&lt;br /&gt;
== Leaf Litter Pack ==&lt;br /&gt;
&lt;br /&gt;
In a leaf litter pack you fill a mesh bag, usually a small 1/4 inch opening, with leaves and lettuce. The size in the mesh is varying depending on the size of [[organisms|organisms]] you are looking to catch. The mesh has to be large enough so they can crawl into the bag, and small enough so they do not fall out. When picking where you want to place the leaf pack you want to find a low spot on the ground, as this is where there is the most organisms living. This is where the most fertile soil is, and where the moisture content is highest. You dig a small hole in the ground, place the bag in the hole and cover it up with the [[soil|soil]] and surrounding leaves. Then, place a flag sticking out of the ground next to the bag so you can find it later. Let the leaf pack sit for a couple days to allow organisms to get into the bag before you remove it. Next, you dump the leaves out of the bag onto a plate and start looking for organisms like [[slugs]], worms, centipedes, [[mites]], and smaller organisms. You can put them on a petri dish and observe the [[soil organisms|soil organisms]] closer under the microscope to allow you to properly identify them.&lt;br /&gt;
&lt;br /&gt;
[[File:Leaf litter pack.jpg|left thumb|Leaf litter pack ready to be burried]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
&lt;br /&gt;
== Rhizotron ==&lt;br /&gt;
[[File:Rhizotron.jpg|thumb|Rhizotron under ground which allows you to see the root structures]]&lt;br /&gt;
&lt;br /&gt;
A rhizotron is a tunnel built under ground with windows placed all around the tunnel so you can observe the root and organisms interact. The roots from the plants above will grow down eventually hit and grow past the Rhizotron. As a result, the roots grow up to the windows which allows us to see the way the roots grow. We can see the roots along with the [[root hairs]] that grow off the roots. Using this method we can see how thick roots are, how deep they go and how wide spread the roots grow for different plants in different [[soil|soil]] types. Using a rhizotron is very useful in a forest for research as scientists can measure and observe the interactions that occur on and around the roots. From the roots holding down the tree or other plants, to the interactions with the micro organisms living next to the root hairs. Scientists can learn a lot for using a rhizotron in a way that they do not have to dig up all the roots to see how they look and work. They can also observe [[Nutrient Cycling|Nutrient Cycling]] within forest ecosystems from within the soil. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
----&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&lt;br /&gt;
Bug Hunter, bughunter.tamu.edu/collection/collectionequipment/berlese-funnel/. &lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“What Is a Rhizotron?” Effects of Emerald Ash Borer on Forest Ecosystems - Emerald Ash Borer - Forest Disturbance Processes - Northern Research Station - USDA Forest Service, www.nrs.fs.fed.us/research/facilities/rhizotron/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Berlese Funnels - Collecting Methods - Mississippi Entomological Museum Home.” Camponotus(Tanaemyrmex) Castaneus (Latreille) , mississippientomologicalmuseum.org.msstate.edu/collecting.preparation.methods/Berlesefunnel.htm#.WvLuxUxFzIV.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Proper Soil Sampling Techniques.” Volusia County, www.volusia.org/services/community-services/extension/agriculture/proper-soil-sampling-techniques.stml.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
“Leaf Pack Study (Department of Ecosystem Science and Management).” Department of Ecosystem Science and Management (Penn State University), ecosystems.psu.edu/youth/sftrc/lesson-plans/water/6-8/leafpack.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Animal [[Diversity]] Web, animaldiversity.org/accounts/Arthropoda/classification/.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
Mohamed, Awaz, et al. “An Evaluation of Inexpensive Methods for Root Image Acquisition When Using Rhizotrons.” Plant Methods, BioMed Central, 7 Mar. 2017, plantmethods.biomedcentral.com/articles/10.1186/s13007-017-0160-z.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6787</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6787"/>
		<updated>2021-05-05T18:06:17Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
[[File:Allelopathy-factors-processes.png|400px|thumb|right|Overall processes of allelopathy and factors affecting allelopathy. This figure describes the way of allelochemical production from the plant, i.e., leaches from the aerial parts, root exudates, transpiration, and stem flow. In addition, it also reports that allelochemical compounds mostly include phenolic compounds, terpenes, and fatty acids which suppress the weeds and cause improvement in the production of crop. Noor et al. 2016]]&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds allow plants to behave plastically in numerous ways.[3] The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition1. [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense.&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=File:Allelopathy-factors-processes.png&amp;diff=6785</id>
		<title>File:Allelopathy-factors-processes.png</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=File:Allelopathy-factors-processes.png&amp;diff=6785"/>
		<updated>2021-05-05T18:05:07Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: Overall processes of allelopathy and factors affecting allelopathy.
This figure describes the way of allelochemical production from the plant,
i.e., leaches from the aerial parts, root exudates, transpiration, and stem
flow. In addition, it also report...&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Overall processes of allelopathy and factors affecting allelopathy.&lt;br /&gt;
This figure describes the way of allelochemical production from the plant,&lt;br /&gt;
i.e., leaches from the aerial parts, root exudates, transpiration, and stem&lt;br /&gt;
flow. In addition, it also reports that allelochemical compounds mostly&lt;br /&gt;
include phenolic compounds, terpenes, and fatty acids which suppress the&lt;br /&gt;
weeds and cause improvement in the production of crop. Noor et al. 2016&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6767</id>
		<title>Microclimate</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Microclimate&amp;diff=6767"/>
		<updated>2021-05-05T17:58:48Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Microclimate is the set of atmospheric conditions that occur in a local area as a result of environmental heterogeneity near the Earth’s surface (Geiger 1965). Microclimates play an integral role in ecosystem processes. Microclimatic variations in energy and moisture directly affect a number of key ecological processes in forest ecosystems occurring at multiple spatial and temporal scales. [[File:Microclimate1.png|400px|thumb|right|Schematic of microclimatic processes relating to heat and water transfer of an organism, Kearney et al]]&lt;br /&gt;
==Influences on Microclimate==&lt;br /&gt;
The two major sources of microclimate variability are differences in energy and moisture, or temperature and humidity. However, succession is often community driven even if there are harsher abiotic limits set, so herbaceous and woody species also have an influence. Differences in temperature and humidity can have numerous drivers, including aspect, (direction that a slope faces,) successional stage, vegetation and canopy presence. The presence of bodies of water can also influence microclimate, as they may increase humidity and stabilize temperature. &lt;br /&gt;
==In Soils==&lt;br /&gt;
Consideration of the microclimate is particularly important in [[soil]] [[ecology]], as the heterogenous nature of soil means that numerous microclimates are present in very small areas of soils. This high heterogeneity of conditions may contribute to high soil biodiversity. &lt;br /&gt;
Soil microclimate can affect macroaggregate dynamics and [[Aggregate formation]]. Soil erodability is reduced in warmer climates, which prevents the occurrence of fragile microaggregates caused by freeze-thaw events.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=File:Microclimate1.png&amp;diff=6765</id>
		<title>File:Microclimate1.png</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=File:Microclimate1.png&amp;diff=6765"/>
		<updated>2021-05-05T17:56:40Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: Schematic of microclimatic processes relating to heat and water transfer of an organism&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Schematic of microclimatic processes relating to heat and water transfer of an organism&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
	<entry>
		<id>https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6755</id>
		<title>Allelopathy</title>
		<link rel="alternate" type="text/html" href="https://soil.evs.buffalo.edu/index.php?title=Allelopathy&amp;diff=6755"/>
		<updated>2021-05-05T17:42:05Z</updated>

		<summary type="html">&lt;p&gt;Ajacobs5: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Allelopathy (Gr: allelon (of each other) and pathos (to suffer)) is broadly defined as any chemical-mediated interaction among plants, though it is typically thought of as a mechanism of inhibition. [1]  The term allelopathy was coined in 1937 by Hans Molisch to refer to any biological interactions between all types of plants, but was refined by Rice in 1974 as “any direct  or   indirect   harmful   effect   by   one   plant   (including   [[microorganisms]])   on   another   through   production   of   chemical compounds that escape into the environment.” [2]&lt;br /&gt;
&lt;br /&gt;
== Mechanism ==&lt;br /&gt;
Allelopathy is caused by the release of secondary compounds into the [[soil]]. Secondary compounds allow plants to behave plastically in numerous ways.[3] The effect of allelopathy depends on a chemical being added to the environment, distinguishing this form of interference from competition1. [[Flavonoids]], for example, act as a signaling agent and chelation agent while also playing a role in plant defense.&lt;br /&gt;
&lt;br /&gt;
== Evolution ==&lt;br /&gt;
Generally, the secondary metabolites that act as allelochemicals serve other purposes in the plants function; natural selection should favor secondary metabolites with multiple functions because they protect the plants against a variety of unpredictable biotic and abiotic environments.[4] &lt;br /&gt;
Allelopathy may also drive evolution in the neighbors of allelopathic plants as well: one study found that individuals grown from seeds of parents that have survived exposure to allelochemicals in &#039;&#039;Centaurea stoebe&#039;&#039; have exhibited much higher resistance to the general competitive effects of  Centaurea, the root exudates from  Centaurea, and to a chemical speciﬁc to the root exudates of  &#039;&#039;Centaurea&#039;&#039; ( ± )-catechin relative to other native species that have not previously encountered &#039;&#039;Centaurea maculosa&#039;&#039;[5].&lt;br /&gt;
&lt;br /&gt;
== Ecology ==&lt;br /&gt;
Chemicals produced by plants have strong effects on ecosystem [[properties]], altering [[rhizosphere]] chemistry, chelating metals, altering soil community interactions, and shifting plant community interactions [6]. &lt;br /&gt;
&lt;br /&gt;
=== Role in Biological Invasion ===&lt;br /&gt;
A comparison of exotic plant species that are highly invasive in North America with exotics that are widespread, but non-invasive revealed that the invasive plants were more likely to have secondary compounds that have not been reported from North American native plants.[7]&lt;br /&gt;
According to the Novel Weapons Hypothesis, invasive species possess novel weapons in the form of chemicals that suppress the growth of neighboring plants in an alien environment, allowing them to spread and form their own monocultures. In the native range, such species grow normally in association with other plants. Seemingly, the native plants’ tolerance evolves toward chemicals or the so-called novel weapons on account of their long association. [8]&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
1.	Rice, E. L. ALLELOPATHY - AN OVERVIEW. 2.&lt;br /&gt;
&lt;br /&gt;
2.	Amb, M. K. &amp;amp; Ahluwalia, A. S. Allelopathy: Potential Role to Achieve New Milestones in Rice Cultivation. Rice Science 23, 165–183 (2016).&lt;br /&gt;
&lt;br /&gt;
3.	Metlen, K. L., Aschehoug, E. T. &amp;amp; Callaway, R. M. Plant behavioural [[ecology]]: dynamic plasticity in secondary metabolites. Plant, Cell &amp;amp; Environment 32, 641–653 (2009).&lt;br /&gt;
&lt;br /&gt;
4.	Izhaki, I. Emodin - a secondary metabolite with multiple ecological functions in higher plants. New Phytol 155, 205–217 (2002).&lt;br /&gt;
&lt;br /&gt;
5.	Callaway, R. M. Natural selection for resistance to the allelopathic effects of invasive plants. natural selection 8 (2005).&lt;br /&gt;
&lt;br /&gt;
6.	Inderjit, Wardle, D. A., Karban, R. &amp;amp; Callaway, R. M. The ecosystem and evolutionary contexts of allelopathy. Trends in Ecology &amp;amp; Evolution 26, 655–662 (2011).&lt;br /&gt;
&lt;br /&gt;
7.	Cappuccino, N. &amp;amp; Arnason, J. T. Novel chemistry of invasive exotic plants. Biol. Lett. 2, 189–193 (2006).&lt;br /&gt;
&lt;br /&gt;
8.	Batish, D., Singh, H., Kaur, S. &amp;amp; Kohli, R. Novel weapon hypothesis for the successful establishment of invasive plants in alien environments: A critical appraisal. in Invasive Plant Ecology 19–28 (CRC Press, 2013). doi:10.1201/b13865-4.&lt;/div&gt;</summary>
		<author><name>Ajacobs5</name></author>
	</entry>
</feed>